Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.84□□□□□ -0.19
Vcam1P29533 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.84□□□□□ -0.19
Vcam1P29533 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.83□□□□□ -0.19
Vcam1P29533 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Vcam1P29533 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vcam1P29533 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vcam1P29533 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Vcam1P29533 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vcam1P29533 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vcam1P29533 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vcam1P29533 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm11783-201ENSMUST00000119549 885 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm12036-201ENSMUST00000120008 530 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.83□□□□□ -0.2
Vcam1P29533 Gm22138-201ENSMUST00000158748 128 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Gm28937-201ENSMUST00000185413 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm29400-201ENSMUST00000187208 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm28662-201ENSMUST00000188446 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm28251-201ENSMUST00000188835 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm37458-201ENSMUST00000194055 410 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm37318-201ENSMUST00000194325 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm38017-201ENSMUST00000194768 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm37287-201ENSMUST00000195449 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Gm37793-201ENSMUST00000195548 695 ntBASIC13.83□□□□□ -0.2
Vcam1P29533 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.83□□□□□ -0.2
Vcam1P29533 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.83□□□□□ -0.2
Vcam1P29533 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vcam1P29533 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Vcam1P29533 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Vcam1P29533 Gm12899-201ENSMUST00000120565 551 ntBASIC13.82□□□□□ -0.2
Vcam1P29533 Gm14441-201ENSMUST00000121960 540 ntBASIC13.82□□□□□ -0.2
Vcam1P29533 Gm8459-201ENSMUST00000162504 760 ntBASIC13.82□□□□□ -0.2
Vcam1P29533 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vcam1P29533 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.82□□□□□ -0.2
Vcam1P29533 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.82□□□□□ -0.2
Vcam1P29533 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.82□□□□□ -0.2
Vcam1P29533 Gm45219-201ENSMUST00000205602 465 ntBASIC13.82□□□□□ -0.2
Vcam1P29533 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Vcam1P29533 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.82□□□□□ -0.2
Vcam1P29533 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vcam1P29533 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Vcam1P29533 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vcam1P29533 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vcam1P29533 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vcam1P29533 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Vcam1P29533 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.81□□□□□ -0.2
Vcam1P29533 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vcam1P29533 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Vcam1P29533 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.81□□□□□ -0.2
Vcam1P29533 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms