Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Pde6aP27664 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Gm15711-201ENSMUST00000118889 535 ntBASIC13.98□□□□□ -0.17
Pde6aP27664 Gm15004-201ENSMUST00000119192 630 ntBASIC13.98□□□□□ -0.17
Pde6aP27664 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Pde6aP27664 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.98□□□□□ -0.17
Pde6aP27664 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.98□□□□□ -0.17
Pde6aP27664 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Pde6aP27664 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Cog3-203ENSMUST00000227473 4197 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.97□□□□□ -0.17
Pde6aP27664 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Pde6aP27664 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.97□□□□□ -0.17
Pde6aP27664 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.97□□□□□ -0.17
Pde6aP27664 Gm11509-201ENSMUST00000117358 325 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Gm12997-201ENSMUST00000120207 640 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Gm35960-201ENSMUST00000202712 767 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Pde6aP27664 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Gm18212-201ENSMUST00000211678 889 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pde6aP27664 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pde6aP27664 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.97□□□□□ -0.17
Pde6aP27664 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pde6aP27664 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Pde6aP27664 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Pde6aP27664 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pde6aP27664 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Pde6aP27664 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.96□□□□□ -0.17
Pde6aP27664 Gm11439-201ENSMUST00000118598 409 ntBASIC13.96□□□□□ -0.17
Pde6aP27664 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.96□□□□□ -0.17
Pde6aP27664 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Gm27341-201ENSMUST00000183570 106 ntBASIC13.96□□□□□ -0.17
Pde6aP27664 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.96□□□□□ -0.17
Pde6aP27664 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pde6aP27664 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms