Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm13611-201ENSMUST00000118269 318 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm12501-201ENSMUST00000119163 529 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm12196-201ENSMUST00000120954 262 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm25881-201ENSMUST00000157783 103 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm9630-201ENSMUST00000178304 885 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm43184-201ENSMUST00000197247 542 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm807-202ENSMUST00000224929 408 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm26448-201ENSMUST00000082446 203 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm21811-201ENSMUST00000096485 930 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.44□□□□□ -0.42
Nfkb1P25799 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nfkb1P25799 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm12164-201ENSMUST00000121695 551 ntBASIC12.43□□□□□ -0.42
Nfkb1P25799 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm22334-201ENSMUST00000158070 133 ntBASIC12.43□□□□□ -0.42
Nfkb1P25799 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm27530-201ENSMUST00000184096 98 ntBASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.43□□□□□ -0.42
Nfkb1P25799 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nfkb1P25799 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.43□□□□□ -0.42
Nfkb1P25799 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nfkb1P25799 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.42□□□□□ -0.42
Nfkb1P25799 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.42□□□□□ -0.42
Nfkb1P25799 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nfkb1P25799 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms