Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
BdnfP21237 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
BdnfP21237 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
BdnfP21237 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
BdnfP21237 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
BdnfP21237 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.62□□□□□ -0.55
BdnfP21237 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.62□□□□□ -0.55
BdnfP21237 Gm9083-201ENSMUST00000120423 819 ntBASIC11.62□□□□□ -0.55
BdnfP21237 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.62□□□□□ -0.55
BdnfP21237 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.62□□□□□ -0.55
BdnfP21237 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Gm7809-201ENSMUST00000153199 742 ntBASIC11.62□□□□□ -0.55
BdnfP21237 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.62□□□□□ -0.55
BdnfP21237 Gm18584-201ENSMUST00000203098 964 ntBASIC11.62□□□□□ -0.55
BdnfP21237 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.62□□□□□ -0.55
BdnfP21237 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.62□□□□□ -0.55
BdnfP21237 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
BdnfP21237 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
BdnfP21237 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
BdnfP21237 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
BdnfP21237 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.62□□□□□ -0.55
BdnfP21237 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
BdnfP21237 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.62□□□□□ -0.55
BdnfP21237 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
BdnfP21237 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
BdnfP21237 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
BdnfP21237 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
BdnfP21237 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.61□□□□□ -0.55
BdnfP21237 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
BdnfP21237 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.61□□□□□ -0.55
BdnfP21237 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.61□□□□□ -0.55
BdnfP21237 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.61□□□□□ -0.55
BdnfP21237 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
BdnfP21237 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.61□□□□□ -0.55
BdnfP21237 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.61□□□□□ -0.55
BdnfP21237 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
BdnfP21237 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
BdnfP21237 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
BdnfP21237 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.61□□□□□ -0.55
BdnfP21237 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
BdnfP21237 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.61□□□□□ -0.55
BdnfP21237 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
BdnfP21237 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms