Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Gm9797-202ENSMUST00000218003 294 ntBASIC15.53■□□□□ 0.08
Prim1P20664 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.53■□□□□ 0.08
Prim1P20664 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.53■□□□□ 0.08
Prim1P20664 AC173482.2-201ENSMUST00000224044 750 ntBASIC15.53■□□□□ 0.08
Prim1P20664 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Prim1P20664 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.53■□□□□ 0.08
Prim1P20664 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prim1P20664 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Prim1P20664 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Prim1P20664 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Prim1P20664 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prim1P20664 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prim1P20664 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prim1P20664 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Prim1P20664 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prim1P20664 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prim1P20664 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prim1P20664 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Prim1P20664 Gm12165-201ENSMUST00000117047 342 ntBASIC15.52■□□□□ 0.08
Prim1P20664 Gm7851-201ENSMUST00000117574 323 ntBASIC15.52■□□□□ 0.08
Prim1P20664 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC15.52■□□□□ 0.08
Prim1P20664 Gm22334-201ENSMUST00000158070 133 ntBASIC15.52■□□□□ 0.08
Prim1P20664 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Prim1P20664 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Prim1P20664 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Prim1P20664 Gm8343-201ENSMUST00000182705 994 ntBASIC15.52■□□□□ 0.08
Prim1P20664 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.52■□□□□ 0.08
Prim1P20664 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC15.52■□□□□ 0.08
Prim1P20664 AC132384.10-201ENSMUST00000217862 1204 ntBASIC15.52■□□□□ 0.08
Prim1P20664 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.52■□□□□ 0.08
Prim1P20664 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.52■□□□□ 0.08
Prim1P20664 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Prim1P20664 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Prim1P20664 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prim1P20664 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.52■□□□□ 0.08
Prim1P20664 Gm17435-202ENSMUST00000212699 1998 ntBASIC15.52■□□□□ 0.07
Prim1P20664 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.52■□□□□ 0.07
Prim1P20664 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prim1P20664 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prim1P20664 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prim1P20664 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Prim1P20664 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prim1P20664 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prim1P20664 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prim1P20664 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prim1P20664 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.51■□□□□ 0.07
Prim1P20664 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.51■□□□□ 0.07
Prim1P20664 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Gm12857-201ENSMUST00000117678 592 ntBASIC15.51■□□□□ 0.07
Prim1P20664 Gm9062-201ENSMUST00000117712 727 ntBASIC15.51■□□□□ 0.07
Prim1P20664 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Prim1P20664 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.51■□□□□ 0.07
Prim1P20664 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.51■□□□□ 0.07
Prim1P20664 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.51■□□□□ 0.07
Prim1P20664 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.51■□□□□ 0.07
Prim1P20664 Gm4157-201ENSMUST00000211647 679 ntBASIC15.51■□□□□ 0.07
Prim1P20664 AC118006.2-201ENSMUST00000224167 962 ntBASIC15.51■□□□□ 0.07
Prim1P20664 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prim1P20664 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prim1P20664 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms