Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
VimP20152 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
VimP20152 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
VimP20152 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.22□□□□□ -0.45
VimP20152 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.22□□□□□ -0.45
VimP20152 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.22□□□□□ -0.45
VimP20152 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.22□□□□□ -0.45
VimP20152 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Gm9022-201ENSMUST00000182482 992 ntBASIC12.22□□□□□ -0.45
VimP20152 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
VimP20152 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.22□□□□□ -0.45
VimP20152 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.22□□□□□ -0.45
VimP20152 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
VimP20152 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
VimP20152 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
VimP20152 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
VimP20152 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
VimP20152 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.21□□□□□ -0.45
VimP20152 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
VimP20152 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.21□□□□□ -0.45
VimP20152 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
VimP20152 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
VimP20152 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.21□□□□□ -0.45
VimP20152 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.21□□□□□ -0.45
VimP20152 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.21□□□□□ -0.45
VimP20152 Gm8000-201ENSMUST00000188378 592 ntBASIC12.21□□□□□ -0.45
VimP20152 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.21□□□□□ -0.45
VimP20152 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Gm20445-201ENSMUST00000061905 565 ntBASIC12.21□□□□□ -0.45
VimP20152 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
VimP20152 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
VimP20152 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
VimP20152 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VimP20152 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
VimP20152 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
VimP20152 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VimP20152 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
VimP20152 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
VimP20152 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.2□□□□□ -0.46
VimP20152 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
VimP20152 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
VimP20152 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
VimP20152 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.2□□□□□ -0.46
VimP20152 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
VimP20152 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
VimP20152 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.2□□□□□ -0.46
VimP20152 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
VimP20152 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.2□□□□□ -0.46
VimP20152 Gm44397-201ENSMUST00000195950 113 ntBASIC12.2□□□□□ -0.46
VimP20152 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms