Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Gm25076-201ENSMUST00000104098 132 ntBASIC13.37□□□□□ -0.27
Hoxc6P10629 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.37□□□□□ -0.27
Hoxc6P10629 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.37□□□□□ -0.27
Hoxc6P10629 Gm12407-201ENSMUST00000180219 324 ntBASIC13.37□□□□□ -0.27
Hoxc6P10629 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC13.37□□□□□ -0.27
Hoxc6P10629 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hoxc6P10629 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hoxc6P10629 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hoxc6P10629 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.36□□□□□ -0.27
Hoxc6P10629 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.36□□□□□ -0.27
Hoxc6P10629 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.36□□□□□ -0.27
Hoxc6P10629 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxc6P10629 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.36□□□□□ -0.27
Hoxc6P10629 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hoxc6P10629 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.36□□□□□ -0.27
Hoxc6P10629 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hoxc6P10629 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Hoxc6P10629 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hoxc6P10629 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm15610-201ENSMUST00000120584 195 ntBASIC13.35□□□□□ -0.27
Hoxc6P10629 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm3150-201ENSMUST00000166418 204 ntBASIC13.35□□□□□ -0.27
Hoxc6P10629 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm43852-201ENSMUST00000202098 917 ntBASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm6108-201ENSMUST00000208365 367 ntBASIC13.35□□□□□ -0.27
Hoxc6P10629 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hoxc6P10629 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.35□□□□□ -0.27
Hoxc6P10629 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms