Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.52□□□□□ -0.73
UbbP0CG49 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
UbbP0CG49 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.52□□□□□ -0.73
UbbP0CG49 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
UbbP0CG49 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.51□□□□□ -0.73
UbbP0CG49 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UbbP0CG49 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
UbbP0CG49 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 Gm7029-201ENSMUST00000173226 450 ntBASIC10.51□□□□□ -0.73
UbbP0CG49 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.51□□□□□ -0.73
UbbP0CG49 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.51□□□□□ -0.73
UbbP0CG49 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
UbbP0CG49 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UbbP0CG49 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UbbP0CG49 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.51□□□□□ -0.73
UbbP0CG49 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
UbbP0CG49 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UbbP0CG49 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.51□□□□□ -0.73
UbbP0CG49 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.51□□□□□ -0.73
UbbP0CG49 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.5□□□□□ -0.73
UbbP0CG49 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
UbbP0CG49 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Gm15806-201ENSMUST00000120696 955 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm27847-201ENSMUST00000183711 107 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Gm27375-201ENSMUST00000183799 107 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
UbbP0CG49 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Gm6745-201ENSMUST00000199216 526 ntBASIC10.5□□□□□ -0.73
UbbP0CG49 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
UbbP0CG49 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms