Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Mir6927-201ENSMUST00000184494 71 ntBASIC11.22□□□□□ -0.61
Ctla4P09793 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Ctla4P09793 AY036118-201ENSMUST00000200021 923 ntBASIC11.22□□□□□ -0.61
Ctla4P09793 Rps4l-202ENSMUST00000204242 789 ntBASIC11.22□□□□□ -0.61
Ctla4P09793 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.22□□□□□ -0.61
Ctla4P09793 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.22□□□□□ -0.61
Ctla4P09793 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ctla4P09793 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ctla4P09793 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ctla4P09793 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ctla4P09793 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Ctla4P09793 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Ctla4P09793 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.21□□□□□ -0.61
Ctla4P09793 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ctla4P09793 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Ctla4P09793 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm22133-201ENSMUST00000102082 109 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Gm12217-201ENSMUST00000118858 696 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm12164-201ENSMUST00000121695 551 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.21□□□□□ -0.61
Ctla4P09793 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm5616-201ENSMUST00000165252 384 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm8741-201ENSMUST00000174736 384 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Gm28071-201ENSMUST00000190355 478 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Gm18730-201ENSMUST00000218038 343 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.21□□□□□ -0.61
Ctla4P09793 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Ctla4P09793 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Ctla4P09793 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ctla4P09793 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Ctla4P09793 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ctla4P09793 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ctla4P09793 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Ctla4P09793 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.21□□□□□ -0.62
Ctla4P09793 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.21□□□□□ -0.62
Ctla4P09793 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Ctla4P09793 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ctla4P09793 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.21□□□□□ -0.62
Ctla4P09793 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ctla4P09793 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ctla4P09793 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Ctla4P09793 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Ctla4P09793 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.21□□□□□ -0.62
Ctla4P09793 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.2□□□□□ -0.62
Ctla4P09793 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ctla4P09793 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.2□□□□□ -0.62
Ctla4P09793 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ctla4P09793 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Ctla4P09793 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ctla4P09793 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ctla4P09793 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ctla4P09793 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Ctla4P09793 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Ctla4P09793 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms