Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
NclP09405 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC17.92■□□□□ 0.46
NclP09405 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NclP09405 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC17.92■□□□□ 0.46
NclP09405 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC17.92■□□□□ 0.46
NclP09405 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NclP09405 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NclP09405 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NclP09405 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC17.91■□□□□ 0.46
NclP09405 Gm8566-201ENSMUST00000120174 465 ntBASIC17.91■□□□□ 0.46
NclP09405 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC17.91■□□□□ 0.46
NclP09405 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NclP09405 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC17.91■□□□□ 0.46
NclP09405 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
NclP09405 Gm37246-201ENSMUST00000192665 835 ntBASIC17.91■□□□□ 0.46
NclP09405 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC17.91■□□□□ 0.46
NclP09405 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC17.91■□□□□ 0.46
NclP09405 Gm14267-206ENSMUST00000226870 1209 ntBASIC17.91■□□□□ 0.46
NclP09405 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NclP09405 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC17.91■□□□□ 0.46
NclP09405 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NclP09405 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NclP09405 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NclP09405 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NclP09405 Gm15432-201ENSMUST00000121106 195 ntBASIC17.9■□□□□ 0.46
NclP09405 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC17.9■□□□□ 0.46
NclP09405 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Gm24514-201ENSMUST00000174961 285 ntBASIC17.9■□□□□ 0.46
NclP09405 Gm6905-201ENSMUST00000205729 511 ntBASIC17.9■□□□□ 0.46
NclP09405 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC17.9■□□□□ 0.46
NclP09405 AC154276.3-201ENSMUST00000227643 998 ntBASIC17.9■□□□□ 0.46
NclP09405 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC17.9■□□□□ 0.46
NclP09405 Gm10288-201ENSMUST00000084614 537 ntBASIC17.9■□□□□ 0.46
NclP09405 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC17.9■□□□□ 0.46
NclP09405 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
NclP09405 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC17.9■□□□□ 0.46
NclP09405 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NclP09405 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NclP09405 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
NclP09405 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NclP09405 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NclP09405 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NclP09405 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NclP09405 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NclP09405 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC17.89■□□□□ 0.45
NclP09405 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Gm43463-201ENSMUST00000195967 1803 ntBASIC17.89■□□□□ 0.45
NclP09405 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Gm37131-201ENSMUST00000192502 1561 ntBASIC17.89■□□□□ 0.45
NclP09405 Gm28686-201ENSMUST00000187404 609 ntBASIC17.89■□□□□ 0.45
NclP09405 Gm18893-201ENSMUST00000198416 943 ntBASIC17.89■□□□□ 0.45
NclP09405 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NclP09405 Gm9797-202ENSMUST00000218003 294 ntBASIC17.89■□□□□ 0.45
NclP09405 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Gm10702-201ENSMUST00000098929 1268 ntBASIC17.89■□□□□ 0.45
NclP09405 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC17.89■□□□□ 0.45
NclP09405 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NclP09405 Adra1a-206ENSMUST00000225182 2337 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms