Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ApoeP08226 Gm23912-201ENSMUST00000104687 87 ntBASIC11.43□□□□□ -0.58
ApoeP08226 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.43□□□□□ -0.58
ApoeP08226 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.43□□□□□ -0.58
ApoeP08226 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
ApoeP08226 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.43□□□□□ -0.58
ApoeP08226 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.43□□□□□ -0.58
ApoeP08226 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.43□□□□□ -0.58
ApoeP08226 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ApoeP08226 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
ApoeP08226 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
ApoeP08226 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
ApoeP08226 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ApoeP08226 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
ApoeP08226 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.43□□□□□ -0.58
ApoeP08226 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
ApoeP08226 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.42□□□□□ -0.58
ApoeP08226 Gm7029-201ENSMUST00000173226 450 ntBASIC11.42□□□□□ -0.58
ApoeP08226 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Gm9136-201ENSMUST00000193368 454 ntBASIC11.42□□□□□ -0.58
ApoeP08226 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
ApoeP08226 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.42□□□□□ -0.58
ApoeP08226 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.42□□□□□ -0.58
ApoeP08226 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.42□□□□□ -0.58
ApoeP08226 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Gm8420-201ENSMUST00000097103 598 ntBASIC11.42□□□□□ -0.58
ApoeP08226 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.42□□□□□ -0.58
ApoeP08226 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
ApoeP08226 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.42□□□□□ -0.58
ApoeP08226 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ApoeP08226 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ApoeP08226 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.41□□□□□ -0.58
ApoeP08226 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
ApoeP08226 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.41□□□□□ -0.58
ApoeP08226 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Gm18018-201ENSMUST00000198273 408 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.41□□□□□ -0.58
ApoeP08226 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.41□□□□□ -0.58
ApoeP08226 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.41□□□□□ -0.58
ApoeP08226 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Gm29705-201ENSMUST00000212598 474 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Gm45925-201ENSMUST00000218882 744 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Gm5781-201ENSMUST00000219792 443 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ApoeP08226 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 Gm10076-201ENSMUST00000073238 384 ntBASIC11.41□□□□□ -0.58
ApoeP08226 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ApoeP08226 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms