Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P01852 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
P01852 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.08□□□□□ -0.64
P01852 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01852 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.08□□□□□ -0.64
P01852 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P01852 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.07□□□□□ -0.64
P01852 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.07□□□□□ -0.64
P01852 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.07□□□□□ -0.64
P01852 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.07□□□□□ -0.64
P01852 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01852 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P01852 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Gm13296-201ENSMUST00000117854 997 ntBASIC11.07□□□□□ -0.64
P01852 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.07□□□□□ -0.64
P01852 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.07□□□□□ -0.64
P01852 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.07□□□□□ -0.64
P01852 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.07□□□□□ -0.64
P01852 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.07□□□□□ -0.64
P01852 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.07□□□□□ -0.64
P01852 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
P01852 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.07□□□□□ -0.64
P01852 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.07□□□□□ -0.64
P01852 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
P01852 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P01852 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.07□□□□□ -0.64
P01852 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.06□□□□□ -0.64
P01852 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.06□□□□□ -0.64
P01852 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P01852 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.06□□□□□ -0.64
P01852 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P01852 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.06□□□□□ -0.64
P01852 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gm23912-201ENSMUST00000104687 87 ntBASIC11.06□□□□□ -0.64
P01852 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
P01852 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.06□□□□□ -0.64
P01852 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gm25700-201ENSMUST00000177693 110 ntBASIC11.06□□□□□ -0.64
P01852 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
P01852 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.06□□□□□ -0.64
P01852 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.06□□□□□ -0.64
P01852 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.06□□□□□ -0.64
P01852 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
P01852 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.06□□□□□ -0.64
P01852 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.06□□□□□ -0.64
P01852 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.06□□□□□ -0.64
P01852 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P01852 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms