Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vti1aO89116 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.07□□□□□ -0.32
Vti1aO89116 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1aO89116 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.07□□□□□ -0.32
Vti1aO89116 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.06□□□□□ -0.32
Vti1aO89116 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.06□□□□□ -0.32
Vti1aO89116 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vti1aO89116 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.06□□□□□ -0.32
Vti1aO89116 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.06□□□□□ -0.32
Vti1aO89116 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Gm15432-201ENSMUST00000121106 195 ntBASIC13.06□□□□□ -0.32
Vti1aO89116 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.06□□□□□ -0.32
Vti1aO89116 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.06□□□□□ -0.32
Vti1aO89116 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.06□□□□□ -0.32
Vti1aO89116 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.06□□□□□ -0.32
Vti1aO89116 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vti1aO89116 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.06□□□□□ -0.32
Vti1aO89116 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vti1aO89116 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1aO89116 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Vti1aO89116 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.05□□□□□ -0.32
Vti1aO89116 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.05□□□□□ -0.32
Vti1aO89116 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1aO89116 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Vti1aO89116 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm18304-201ENSMUST00000189162 546 ntBASIC13.05□□□□□ -0.32
Vti1aO89116 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.05□□□□□ -0.32
Vti1aO89116 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.05□□□□□ -0.32
Vti1aO89116 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vti1aO89116 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.05□□□□□ -0.32
Vti1aO89116 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.05□□□□□ -0.32
Vti1aO89116 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vti1aO89116 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.05□□□□□ -0.32
Vti1aO89116 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1aO89116 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Vti1aO89116 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.04□□□□□ -0.32
Vti1aO89116 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.04□□□□□ -0.32
Vti1aO89116 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1aO89116 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms