Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ClppO88696 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
ClppO88696 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
ClppO88696 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
ClppO88696 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
ClppO88696 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ClppO88696 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.9□□□□□ -0.5
ClppO88696 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ClppO88696 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.9□□□□□ -0.51
ClppO88696 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.9□□□□□ -0.51
ClppO88696 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
ClppO88696 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
ClppO88696 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.9□□□□□ -0.51
ClppO88696 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ClppO88696 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.89□□□□□ -0.51
ClppO88696 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
ClppO88696 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ClppO88696 Gm14028-201ENSMUST00000117434 479 ntBASIC11.89□□□□□ -0.51
ClppO88696 Gm7857-201ENSMUST00000117957 358 ntBASIC11.89□□□□□ -0.51
ClppO88696 Gm13996-201ENSMUST00000118456 430 ntBASIC11.89□□□□□ -0.51
ClppO88696 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
ClppO88696 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.89□□□□□ -0.51
ClppO88696 Gm43138-201ENSMUST00000199123 708 ntBASIC11.89□□□□□ -0.51
ClppO88696 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.89□□□□□ -0.51
ClppO88696 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ClppO88696 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClppO88696 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.89□□□□□ -0.51
ClppO88696 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ClppO88696 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClppO88696 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.88□□□□□ -0.51
ClppO88696 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClppO88696 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClppO88696 Gm13296-201ENSMUST00000117854 997 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms