Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pdlim1O70400 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm22133-201ENSMUST00000102082 109 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 AY036118-201ENSMUST00000200021 923 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm17812-201ENSMUST00000204935 318 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm4607-201ENSMUST00000206649 577 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm8913-201ENSMUST00000209491 641 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.97□□□□□ -0.49
Pdlim1O70400 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pdlim1O70400 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pdlim1O70400 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.96□□□□□ -0.49
Pdlim1O70400 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm5616-201ENSMUST00000165252 384 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm8741-201ENSMUST00000174736 384 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm27627-201ENSMUST00000183644 150 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm29615-201ENSMUST00000185371 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm28224-201ENSMUST00000186078 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm29001-201ENSMUST00000186177 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm28292-201ENSMUST00000186593 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm28101-201ENSMUST00000187608 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm29076-201ENSMUST00000187689 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm28302-201ENSMUST00000187931 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm28646-201ENSMUST00000188220 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm28205-201ENSMUST00000189177 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm29032-201ENSMUST00000189797 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm28695-201ENSMUST00000190300 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm37448-201ENSMUST00000192795 697 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm18893-201ENSMUST00000198416 943 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm8956-201ENSMUST00000203939 825 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm45224-201ENSMUST00000208203 414 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Pdlim1O70400 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.96□□□□□ -0.49
Pdlim1O70400 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.96□□□□□ -0.5
Pdlim1O70400 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pdlim1O70400 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Pdlim1O70400 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms