Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.79□□□□□ -0.36
Itgb3O54890 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Itgb3O54890 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Gm11509-201ENSMUST00000117358 325 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Gm15515-201ENSMUST00000117827 822 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 Gm18734-201ENSMUST00000172937 808 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Gm8343-201ENSMUST00000182705 994 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Gm807-202ENSMUST00000224929 408 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Map1b-203ENSMUST00000223725 2669 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.79□□□□□ -0.36
Itgb3O54890 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Itgb3O54890 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Itgb3O54890 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Itgb3O54890 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Itgb3O54890 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.78□□□□□ -0.36
Itgb3O54890 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Itgb3O54890 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.78□□□□□ -0.36
Itgb3O54890 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Mir3102-201ENSMUST00000175555 104 ntBASIC12.78□□□□□ -0.36
Itgb3O54890 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.78□□□□□ -0.36
Itgb3O54890 Gm3332-201ENSMUST00000189337 928 ntBASIC12.78□□□□□ -0.36
Itgb3O54890 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.78□□□□□ -0.36
Itgb3O54890 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Itgb3O54890 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Itgb3O54890 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.78□□□□□ -0.36
Itgb3O54890 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Itgb3O54890 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Itgb3O54890 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Itgb3O54890 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.77□□□□□ -0.36
Itgb3O54890 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Itgb3O54890 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Itgb3O54890 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Itgb3O54890 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Itgb3O54890 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Itgb3O54890 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms