Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.27□□□□□ -0.45
Limk2O54785 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Limk2O54785 Gm17040-202ENSMUST00000170597 889 ntBASIC12.27□□□□□ -0.45
Limk2O54785 Gm32999-201ENSMUST00000192693 562 ntBASIC12.27□□□□□ -0.45
Limk2O54785 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Limk2O54785 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Limk2O54785 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Matn2-203ENSMUST00000226766 3252 ntBASIC12.27□□□□□ -0.45
Limk2O54785 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.27□□□□□ -0.45
Limk2O54785 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Limk2O54785 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Limk2O54785 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Limk2O54785 Gm12036-201ENSMUST00000120008 530 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Gm12164-201ENSMUST00000121695 551 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.26□□□□□ -0.45
Limk2O54785 Gm24749-201ENSMUST00000157838 343 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Mir1943-201ENSMUST00000158276 73 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Gm27552-201ENSMUST00000183351 62 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Gm27844-201ENSMUST00000183613 62 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Limk2O54785 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.26□□□□□ -0.45
Limk2O54785 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.26□□□□□ -0.45
Limk2O54785 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Limk2O54785 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Limk2O54785 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Limk2O54785 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Limk2O54785 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Limk2O54785 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Gm7722-201ENSMUST00000120646 741 ntBASIC12.25□□□□□ -0.45
Limk2O54785 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.25□□□□□ -0.45
Limk2O54785 Gm5706-201ENSMUST00000181525 993 ntBASIC12.25□□□□□ -0.45
Limk2O54785 Gm3508-201ENSMUST00000186012 792 ntBASIC12.25□□□□□ -0.45
Limk2O54785 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.25□□□□□ -0.45
Limk2O54785 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.25□□□□□ -0.45
Limk2O54785 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.25□□□□□ -0.45
Limk2O54785 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.25□□□□□ -0.45
Limk2O54785 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.25□□□□□ -0.45
Limk2O54785 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Limk2O54785 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.25□□□□□ -0.45
Limk2O54785 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Limk2O54785 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.25□□□□□ -0.45
Limk2O54785 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms