Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm27023-201ENSMUST00000182372 285 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Gm27682-201ENSMUST00000183930 110 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Gm9136-201ENSMUST00000193368 454 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Gm42937-201ENSMUST00000197360 752 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.79□□□□□ -0.68
Alx4O35137 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Gm6091-201ENSMUST00000098307 165 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.79□□□□□ -0.68
Alx4O35137 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.79□□□□□ -0.68
Alx4O35137 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Alx4O35137 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.78□□□□□ -0.68
Alx4O35137 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Gm11439-201ENSMUST00000118598 409 ntBASIC10.78□□□□□ -0.68
Alx4O35137 Gm12058-201ENSMUST00000118614 437 ntBASIC10.78□□□□□ -0.68
Alx4O35137 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.78□□□□□ -0.68
Alx4O35137 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.78□□□□□ -0.68
Alx4O35137 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.78□□□□□ -0.68
Alx4O35137 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.78□□□□□ -0.68
Alx4O35137 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Alx4O35137 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.78□□□□□ -0.68
Alx4O35137 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Alx4O35137 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.78□□□□□ -0.68
Alx4O35137 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Alx4O35137 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Alx4O35137 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Alx4O35137 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Alx4O35137 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.77□□□□□ -0.68
Alx4O35137 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
Alx4O35137 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Alx4O35137 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Alx4O35137 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms