Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Gm17827-201ENSMUST00000211825 742 ntBASIC12.34□□□□□ -0.43
AlyrefO08583 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.34□□□□□ -0.43
AlyrefO08583 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
AlyrefO08583 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.34□□□□□ -0.43
AlyrefO08583 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.34□□□□□ -0.43
AlyrefO08583 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AlyrefO08583 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AlyrefO08583 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AlyrefO08583 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AlyrefO08583 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
AlyrefO08583 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
AlyrefO08583 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm22133-201ENSMUST00000102082 109 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm14644-201ENSMUST00000116671 647 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
AlyrefO08583 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
AlyrefO08583 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 Gm28882-201ENSMUST00000185504 314 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm8531-201ENSMUST00000188319 893 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.33□□□□□ -0.44
AlyrefO08583 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AlyrefO08583 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
AlyrefO08583 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.32□□□□□ -0.44
AlyrefO08583 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.32□□□□□ -0.44
AlyrefO08583 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
AlyrefO08583 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.32□□□□□ -0.44
AlyrefO08583 Gm12712-201ENSMUST00000120676 801 ntBASIC12.32□□□□□ -0.44
AlyrefO08583 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.32□□□□□ -0.44
AlyrefO08583 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.32□□□□□ -0.44
AlyrefO08583 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.32□□□□□ -0.44
AlyrefO08583 Gm4462-201ENSMUST00000166453 492 ntBASIC12.32□□□□□ -0.44
AlyrefO08583 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
AlyrefO08583 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
AlyrefO08583 Gm29304-201ENSMUST00000186555 695 ntBASIC12.32□□□□□ -0.44
AlyrefO08583 Gm29223-201ENSMUST00000188867 695 ntBASIC12.32□□□□□ -0.44
AlyrefO08583 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.32□□□□□ -0.44
AlyrefO08583 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms