Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.31□□□□□ -0.92
MsmbO08540 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
MsmbO08540 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Gm9230-201ENSMUST00000188228 532 ntBASIC9.31□□□□□ -0.92
MsmbO08540 Gm32999-201ENSMUST00000192693 562 ntBASIC9.31□□□□□ -0.92
MsmbO08540 Gm7003-201ENSMUST00000195089 312 ntBASIC9.31□□□□□ -0.92
MsmbO08540 Rps4l-202ENSMUST00000204242 789 ntBASIC9.31□□□□□ -0.92
MsmbO08540 Gm44882-201ENSMUST00000205702 802 ntBASIC9.31□□□□□ -0.92
MsmbO08540 Gm19187-201ENSMUST00000206781 892 ntBASIC9.31□□□□□ -0.92
MsmbO08540 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.31□□□□□ -0.92
MsmbO08540 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.31□□□□□ -0.92
MsmbO08540 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
MsmbO08540 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
MsmbO08540 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
MsmbO08540 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
MsmbO08540 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.31□□□□□ -0.92
MsmbO08540 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MsmbO08540 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
MsmbO08540 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Gm14277-201ENSMUST00000121195 360 ntBASIC9.3□□□□□ -0.92
MsmbO08540 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
MsmbO08540 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Gm24990-201ENSMUST00000157406 323 ntBASIC9.3□□□□□ -0.92
MsmbO08540 Gm24749-201ENSMUST00000157838 343 ntBASIC9.3□□□□□ -0.92
MsmbO08540 Rprl1-201ENSMUST00000158050 327 ntBASIC9.3□□□□□ -0.92
MsmbO08540 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.3□□□□□ -0.92
MsmbO08540 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.3□□□□□ -0.92
MsmbO08540 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Gm17812-201ENSMUST00000204935 318 ntBASIC9.3□□□□□ -0.92
MsmbO08540 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
MsmbO08540 Gm8385-201ENSMUST00000058999 643 ntBASIC9.3□□□□□ -0.92
MsmbO08540 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
MsmbO08540 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
MsmbO08540 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
MsmbO08540 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.29□□□□□ -0.92
MsmbO08540 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms