Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm23984-201ENSMUST00000157139 203 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm8018-201ENSMUST00000173536 789 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm18018-201ENSMUST00000198273 408 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Shisa8J3QNX5 AC125209.1-201ENSMUST00000225812 766 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm22058-201ENSMUST00000083393 310 ntBASIC11□□□□□ -0.65
Shisa8J3QNX5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11□□□□□ -0.65
Shisa8J3QNX5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Shisa8J3QNX5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Shisa8J3QNX5 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Gm24196-201ENSMUST00000179161 110 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Mir6977-201ENSMUST00000184960 64 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Gm6180-201ENSMUST00000065243 498 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.99□□□□□ -0.65
Shisa8J3QNX5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Shisa8J3QNX5 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 274.6 ms