Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc180J3QNE4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC21.7■■□□□ 1.07
Ccdc180J3QNE4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc180J3QNE4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc180J3QNE4 Gm36970-201ENSMUST00000193688 1859 ntBASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 AC124457.1-201ENSMUST00000198845 120 ntBASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Gm17825-201ENSMUST00000206836 794 ntBASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ccdc180J3QNE4 Gm25063-201ENSMUST00000104666 94 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Gm44241-201ENSMUST00000203230 1662 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Gm12791-201ENSMUST00000120788 655 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 AC168279.1-201ENSMUST00000214611 382 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Gm30671-201ENSMUST00000214898 318 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 AC114645.1-201ENSMUST00000215831 187 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 CT573047.1-201ENSMUST00000223652 851 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 n-R5s211-201ENSMUST00000093689 119 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc180J3QNE4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm11801-201ENSMUST00000117807 746 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm17192-201ENSMUST00000169031 511 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm20495-201ENSMUST00000173902 235 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm18059-201ENSMUST00000208073 580 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm8436-201ENSMUST00000210152 1080 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm5749-201ENSMUST00000210673 1090 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm6722-201ENSMUST00000221586 390 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gm16380-201ENSMUST00000077997 478 ntBASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc180J3QNE4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 Gm8899-201ENSMUST00000214635 1332 ntBASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 Gm18294-201ENSMUST00000176980 1748 ntBASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 Gm18642-201ENSMUST00000206642 1400 ntBASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 Gm4294-201ENSMUST00000105169 614 ntBASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 AC238811.4-201ENSMUST00000178019 1246 ntBASIC21.67■■□□□ 1.06
Ccdc180J3QNE4 AC238940.3-201ENSMUST00000178830 1246 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms