Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm26286-201ENSMUST00000104166 134 ntBASIC11.14□□□□□ -0.63
TprF6ZDS4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm11578-201ENSMUST00000118530 459 ntBASIC11.14□□□□□ -0.63
TprF6ZDS4 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.14□□□□□ -0.63
TprF6ZDS4 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.14□□□□□ -0.63
TprF6ZDS4 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.14□□□□□ -0.63
TprF6ZDS4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
TprF6ZDS4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm23596-201ENSMUST00000104304 132 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm15352-201ENSMUST00000118696 270 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm15003-201ENSMUST00000118884 446 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm13182-201ENSMUST00000122241 312 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm22144-201ENSMUST00000157402 102 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm6485-201ENSMUST00000160676 439 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm8756-201ENSMUST00000183250 929 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm6450-201ENSMUST00000200896 574 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TprF6ZDS4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm22133-201ENSMUST00000102082 109 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm42433-201ENSMUST00000196806 940 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm43969-201ENSMUST00000204833 535 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm4157-201ENSMUST00000211647 679 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.13□□□□□ -0.63
TprF6ZDS4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
TprF6ZDS4 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
TprF6ZDS4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TprF6ZDS4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms