Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm28043E0CXC2 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gm5187-201ENSMUST00000117317 991 ntBASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gm15703-201ENSMUST00000120250 880 ntBASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm28043E0CXC2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Gm28043E0CXC2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm28043E0CXC2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Gm28043E0CXC2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Gm22018-201ENSMUST00000104357 131 ntBASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Gm37008-201ENSMUST00000195712 319 ntBASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.14□□□□□ -0.47
Gm28043E0CXC2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm28043E0CXC2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms