Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm7722-201ENSMUST00000120646 741 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm11405-201ENSMUST00000118689 1556 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm5100-201ENSMUST00000195631 589 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm19091-201ENSMUST00000208120 978 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm29499-201ENSMUST00000189151 486 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm28329-201ENSMUST00000191208 689 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm29171-201ENSMUST00000191397 486 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm42657-201ENSMUST00000201746 211 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm18059-201ENSMUST00000208073 580 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm45594-201ENSMUST00000211717 241 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Gm5705-201ENSMUST00000066241 711 ntBASIC10.83□□□□□ -0.68
Shank1D3YZU1 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.83□□□□□ -0.68
Shank1D3YZU1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shank1D3YZU1 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms