Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.18□□□□□ -0.46
Col4a6B1AVK5 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gm43671-201ENSMUST00000200422 433 ntBASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.18□□□□□ -0.46
Col4a6B1AVK5 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.18□□□□□ -0.46
Col4a6B1AVK5 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col4a6B1AVK5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Gm11578-201ENSMUST00000118530 459 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Gm9081-201ENSMUST00000182346 991 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Gm34379-201ENSMUST00000195036 290 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col4a6B1AVK5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm13445-201ENSMUST00000121664 307 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm12453-201ENSMUST00000121981 331 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm17214-201ENSMUST00000164501 541 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm38314-201ENSMUST00000195709 625 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm7525-201ENSMUST00000219425 454 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col4a6B1AVK5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms