Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gm3854A0A1B0GSS6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gm3854A0A1B0GSS6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.09□□□□□ -0.47
Gm3854A0A1B0GSS6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm3854A0A1B0GSS6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm3854A0A1B0GSS6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gm3854A0A1B0GSS6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm15004-201ENSMUST00000119192 630 ntBASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm9358-201ENSMUST00000183067 927 ntBASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm3854A0A1B0GSS6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm13916-201ENSMUST00000117368 628 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm8815-201ENSMUST00000173809 620 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm23771-201ENSMUST00000178702 110 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm4034-201ENSMUST00000187674 480 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm3854A0A1B0GSS6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3854A0A1B0GSS6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3854A0A1B0GSS6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3854A0A1B0GSS6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3854A0A1B0GSS6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3854A0A1B0GSS6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3854A0A1B0GSS6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm3854A0A1B0GSS6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms