Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm18062-201ENSMUST00000208020 547 ntBASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm18055-201ENSMUST00000208254 547 ntBASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav6n-6A0A075B6B2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm12390-201ENSMUST00000117897 397 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm12384-201ENSMUST00000119228 919 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm27331-201ENSMUST00000183705 60 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm28693-202ENSMUST00000190758 331 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm26035-201ENSMUST00000083065 308 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trav6n-6A0A075B6B2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Trav6n-6A0A075B6B2 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms