Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav18A0A075B656 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.91□□□□□ -0.82
Trav18A0A075B656 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav18A0A075B656 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Gm13570-201ENSMUST00000140763 309 ntBASIC9.9□□□□□ -0.82
Trav18A0A075B656 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.9□□□□□ -0.82
Trav18A0A075B656 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.9□□□□□ -0.82
Trav18A0A075B656 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.9□□□□□ -0.82
Trav18A0A075B656 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.9□□□□□ -0.82
Trav18A0A075B656 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.9□□□□□ -0.82
Trav18A0A075B656 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav18A0A075B656 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav18A0A075B656 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.89□□□□□ -0.83
Trav18A0A075B656 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.89□□□□□ -0.83
Trav18A0A075B656 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gm12058-201ENSMUST00000118614 437 ntBASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gm14660-201ENSMUST00000119809 575 ntBASIC9.89□□□□□ -0.83
Trav18A0A075B656 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gm13316-201ENSMUST00000140537 691 ntBASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav18A0A075B656 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms