Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm38325-201ENSMUST00000194507 1377 ntBASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm14481-201ENSMUST00000117178 629 ntBASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm15824-201ENSMUST00000119516 955 ntBASIC12.57□□□□□ -0.4
Speer3W4VSP1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.57□□□□□ -0.4
Speer3W4VSP1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.57□□□□□ -0.4
Speer3W4VSP1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.57□□□□□ -0.4
Speer3W4VSP1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.57□□□□□ -0.4
Speer3W4VSP1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Speer3W4VSP1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm8805-201ENSMUST00000117848 313 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm8312-201ENSMUST00000119380 618 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm24196-201ENSMUST00000179161 110 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm9499-201ENSMUST00000180888 964 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm8602-201ENSMUST00000184045 607 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm37005-201ENSMUST00000193281 1164 ntBASIC12.56□□□□□ -0.4
Speer3W4VSP1 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.56□□□□□ -0.4
Speer3W4VSP1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms