Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PdfS4R2K0 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PdfS4R2K0 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PdfS4R2K0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
PdfS4R2K0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PdfS4R2K0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PdfS4R2K0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PdfS4R2K0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.31□□□□□ -0.92
PdfS4R2K0 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm8213-201ENSMUST00000118191 441 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm5276-201ENSMUST00000196683 1047 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.3□□□□□ -0.92
PdfS4R2K0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
PdfS4R2K0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm16202-201ENSMUST00000117532 544 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PdfS4R2K0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm27847-201ENSMUST00000183711 107 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm27375-201ENSMUST00000183799 107 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm29649-201ENSMUST00000185649 419 ntBASIC9.29□□□□□ -0.92
PdfS4R2K0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
PdfS4R2K0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.29□□□□□ -0.92
PdfS4R2K0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PdfS4R2K0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PdfS4R2K0 Gm25857-201ENSMUST00000082788 129 ntBASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms