Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
H2afb2S4R1M3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm43630-201ENSMUST00000201550 776 ntBASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb2S4R1M3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.08□□□□□ -0.47
H2afb2S4R1M3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.08□□□□□ -0.47
H2afb2S4R1M3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
H2afb2S4R1M3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm15610-201ENSMUST00000120584 195 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm5706-201ENSMUST00000181525 993 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Mir8109-201ENSMUST00000184375 117 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm38266-201ENSMUST00000194931 421 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Gm45865-201ENSMUST00000211815 945 ntBASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb2S4R1M3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms