Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm12625-201ENSMUST00000179122 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12614-201ENSMUST00000179586 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12613-201ENSMUST00000180323 382 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smarcb1Q9Z0H3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm13809-201ENSMUST00000117921 597 ntBASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm15432-201ENSMUST00000121106 195 ntBASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm8199-201ENSMUST00000121323 823 ntBASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm28686-201ENSMUST00000187404 609 ntBASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smarcb1Q9Z0H3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gm13461-201ENSMUST00000120980 662 ntBASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Ginm1-202ENSMUST00000065124 300 ntBASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smarcb1Q9Z0H3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms