Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lhx9Q9WUH2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lhx9Q9WUH2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lhx9Q9WUH2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lhx9Q9WUH2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Spcs1-203ENSMUST00000226374 592 ntBASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lhx9Q9WUH2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm22133-201ENSMUST00000102082 109 ntBASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm9062-201ENSMUST00000117712 727 ntBASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm12164-201ENSMUST00000121695 551 ntBASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm5523-201ENSMUST00000180415 997 ntBASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.49□□□□□ -0.57
Lhx9Q9WUH2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lhx9Q9WUH2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lhx9Q9WUH2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Lhx9Q9WUH2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Lhx9Q9WUH2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lhx9Q9WUH2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Lhx9Q9WUH2 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Lhx9Q9WUH2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms