Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Scn8aQ9WTU3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm6485-201ENSMUST00000160676 439 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm8815-201ENSMUST00000173809 620 ntBASIC12.09□□□□□ -0.47
Scn8aQ9WTU3 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms