Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.13□□□□□ -0.15
Scn11aQ9R053 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn11aQ9R053 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn11aQ9R053 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn11aQ9R053 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn11aQ9R053 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scn11aQ9R053 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.12□□□□□ -0.15
Scn11aQ9R053 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm15615-201ENSMUST00000118876 198 ntBASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm17877-201ENSMUST00000192578 814 ntBASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm2875-201ENSMUST00000211333 360 ntBASIC14.12□□□□□ -0.15
Scn11aQ9R053 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 CT010486.3-201ENSMUST00000224555 811 ntBASIC14.12□□□□□ -0.15
Scn11aQ9R053 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.12□□□□□ -0.15
Scn11aQ9R053 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn11aQ9R053 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm13022-201ENSMUST00000121181 285 ntBASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm23105-201ENSMUST00000083719 134 ntBASIC14.11□□□□□ -0.15
Scn11aQ9R053 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.11□□□□□ -0.15
Scn11aQ9R053 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Gm14071-201ENSMUST00000117817 509 ntBASIC14.11□□□□□ -0.15
Scn11aQ9R053 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Ighv1-86-201ENSMUST00000200562 353 ntBASIC14.11□□□□□ -0.15
Scn11aQ9R053 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.11□□□□□ -0.15
Scn11aQ9R053 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.11□□□□□ -0.15
Scn11aQ9R053 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Scn11aQ9R053 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn11aQ9R053 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms