Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Gm39404-201ENSMUST00000216350 313 ntBASIC13.55□□□□□ -0.24
AmfrQ9R049 Gm8712-201ENSMUST00000221090 701 ntBASIC13.55□□□□□ -0.24
AmfrQ9R049 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.55□□□□□ -0.24
AmfrQ9R049 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
AmfrQ9R049 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
AmfrQ9R049 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
AmfrQ9R049 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm13570-201ENSMUST00000140763 309 ntBASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm17376-201ENSMUST00000166016 84 ntBASIC13.54□□□□□ -0.24
AmfrQ9R049 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm18304-201ENSMUST00000189162 546 ntBASIC13.54□□□□□ -0.24
AmfrQ9R049 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
AmfrQ9R049 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AmfrQ9R049 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.54□□□□□ -0.24
AmfrQ9R049 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.54□□□□□ -0.24
AmfrQ9R049 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
AmfrQ9R049 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.53□□□□□ -0.24
AmfrQ9R049 Gm14999-201ENSMUST00000121039 624 ntBASIC13.53□□□□□ -0.24
AmfrQ9R049 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.53□□□□□ -0.24
AmfrQ9R049 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.53□□□□□ -0.24
AmfrQ9R049 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.53□□□□□ -0.24
AmfrQ9R049 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.53□□□□□ -0.24
AmfrQ9R049 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.53□□□□□ -0.24
AmfrQ9R049 Gm35960-201ENSMUST00000202712 767 ntBASIC13.53□□□□□ -0.24
AmfrQ9R049 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.53□□□□□ -0.24
AmfrQ9R049 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.53□□□□□ -0.24
AmfrQ9R049 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.53□□□□□ -0.24
AmfrQ9R049 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
AmfrQ9R049 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
AmfrQ9R049 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AmfrQ9R049 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.52□□□□□ -0.24
AmfrQ9R049 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AmfrQ9R049 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.52□□□□□ -0.24
AmfrQ9R049 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms