Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Mir671-201ENSMUST00000102432 98 ntBASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm12419-201ENSMUST00000116649 636 ntBASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm38117-201ENSMUST00000194653 939 ntBASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm3726-201ENSMUST00000203110 785 ntBASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Gm18514-201ENSMUST00000218980 436 ntBASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.39□□□□□ -0.43
Nkx2-4Q9EQM3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm14247-201ENSMUST00000120950 237 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm8451-201ENSMUST00000170338 447 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm5870-201ENSMUST00000196461 282 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm43752-201ENSMUST00000198475 697 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm7536-201ENSMUST00000077389 444 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm5453-201ENSMUST00000080866 447 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-4Q9EQM3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-4Q9EQM3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms