Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm11918-201ENSMUST00000121660 179 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm28911-201ENSMUST00000188837 117 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm37319-201ENSMUST00000193500 636 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm42660-201ENSMUST00000197733 947 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm7653-201ENSMUST00000214567 508 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm32025-201ENSMUST00000217960 307 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trim13Q9CYB0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Rgr-203ENSMUST00000225070 4704 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm13369-201ENSMUST00000119442 987 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm12138-201ENSMUST00000122180 951 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm5745-201ENSMUST00000183748 313 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm38092-201ENSMUST00000195600 653 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Gm4768-201ENSMUST00000206199 686 ntBASIC11.19□□□□□ -0.62
Trim13Q9CYB0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim13Q9CYB0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.18□□□□□ -0.62
Trim13Q9CYB0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms