Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.33□□□□□ -0.12
Rnaseh2aQ9CWY8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm13094-201ENSMUST00000117930 409 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm15196-201ENSMUST00000121406 482 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm26272-201ENSMUST00000179241 132 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm8384-201ENSMUST00000190905 704 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm6606-201ENSMUST00000193613 947 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 BC080696-201ENSMUST00000202858 1218 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm2448-201ENSMUST00000207080 559 ntBASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm13039-201ENSMUST00000118638 794 ntBASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnaseh2aQ9CWY8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnaseh2aQ9CWY8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnaseh2aQ9CWY8 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms