Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ddx47Q9CWX9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Gm6007-201ENSMUST00000208170 823 ntBASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Gm18624-201ENSMUST00000220966 658 ntBASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ddx47Q9CWX9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gm19163-201ENSMUST00000223313 780 ntBASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ddx47Q9CWX9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Ddx47Q9CWX9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ddx47Q9CWX9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms