Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Gm9823-201ENSMUST00000051212 327 ntBASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim11Q99PQ2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Gm13297-201ENSMUST00000120205 934 ntBASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Gm14247-201ENSMUST00000120950 237 ntBASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Olfr284-202ENSMUST00000206647 966 ntBASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Gm10608-202ENSMUST00000213924 676 ntBASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Trim11Q99PQ2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm12742-201ENSMUST00000117326 410 ntBASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm17420-201ENSMUST00000164753 153 ntBASIC13.78□□□□□ -0.2
Trim11Q99PQ2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm26956-201ENSMUST00000182176 986 ntBASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.78□□□□□ -0.2
Trim11Q99PQ2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim11Q99PQ2 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim11Q99PQ2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim11Q99PQ2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim11Q99PQ2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim11Q99PQ2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim11Q99PQ2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.77□□□□□ -0.21
Trim11Q99PQ2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms