Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm12586-201ENSMUST00000117328 1316 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Gm19210-201ENSMUST00000199562 1350 ntBASIC16.13■□□□□ 0.17
Rtn4Q99P72 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn4Q99P72 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm15933-201ENSMUST00000117215 616 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm17219-201ENSMUST00000168439 593 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm9931-201ENSMUST00000193584 1185 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm43136-201ENSMUST00000200403 636 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm42733-201ENSMUST00000201272 519 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 1700063D05Rik-204ENSMUST00000213914 1007 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Gm5655-201ENSMUST00000221078 901 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 AC154484.1-201ENSMUST00000227311 771 ntBASIC16.12■□□□□ 0.17
Rtn4Q99P72 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Rtn4Q99P72 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm15614-201ENSMUST00000155976 1537 ntTSL 5 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm10686-201ENSMUST00000215389 3247 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm8738-201ENSMUST00000172606 329 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm6621-201ENSMUST00000193251 772 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm44681-201ENSMUST00000208447 842 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 AC105169.1-201ENSMUST00000218912 1294 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 CU024892.1-201ENSMUST00000224869 515 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn4Q99P72 Rab3c-202ENSMUST00000223922 2398 ntBASIC16.11■□□□□ 0.17
Rtn4Q99P72 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Gm7002-201ENSMUST00000221386 2165 ntBASIC16.1■□□□□ 0.17
Rtn4Q99P72 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn4Q99P72 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms