Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdac9Q99N13 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Gm22442-201ENSMUST00000157256 144 ntBASIC14.23□□□□□ -0.13
Hdac9Q99N13 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Gm4654-201ENSMUST00000183305 982 ntBASIC14.23□□□□□ -0.13
Hdac9Q99N13 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.23□□□□□ -0.13
Hdac9Q99N13 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.23□□□□□ -0.13
Hdac9Q99N13 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdac9Q99N13 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm16071-201ENSMUST00000119589 793 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm11675-201ENSMUST00000121873 832 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm4310-201ENSMUST00000177847 889 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Mir8115-201ENSMUST00000184992 119 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm17826-201ENSMUST00000189720 798 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.22□□□□□ -0.13
Hdac9Q99N13 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdac9Q99N13 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac9Q99N13 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac9Q99N13 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdac9Q99N13 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms