Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.8□□□□□ -0.52
Msh4Q99MT2 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.8□□□□□ -0.52
Msh4Q99MT2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.8□□□□□ -0.52
Msh4Q99MT2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.8□□□□□ -0.52
Msh4Q99MT2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh4Q99MT2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.79□□□□□ -0.52
Msh4Q99MT2 Gm13570-201ENSMUST00000140763 309 ntBASIC11.79□□□□□ -0.52
Msh4Q99MT2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Gm10076-201ENSMUST00000073238 384 ntBASIC11.79□□□□□ -0.52
Msh4Q99MT2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.79□□□□□ -0.52
Msh4Q99MT2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Msh4Q99MT2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Gm24231-201ENSMUST00000104315 133 ntBASIC11.78□□□□□ -0.52
Msh4Q99MT2 Gm11930-201ENSMUST00000117788 190 ntBASIC11.78□□□□□ -0.52
Msh4Q99MT2 Gm12314-201ENSMUST00000118104 538 ntBASIC11.78□□□□□ -0.52
Msh4Q99MT2 Gm15808-201ENSMUST00000119046 604 ntBASIC11.78□□□□□ -0.52
Msh4Q99MT2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.78□□□□□ -0.52
Msh4Q99MT2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.78□□□□□ -0.52
Msh4Q99MT2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.78□□□□□ -0.52
Msh4Q99MT2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh4Q99MT2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms