Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col25a1Q99MQ5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col25a1Q99MQ5 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col25a1Q99MQ5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm11619-201ENSMUST00000117474 237 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm15595-201ENSMUST00000120840 961 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm17070-201ENSMUST00000170463 784 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm43184-201ENSMUST00000197247 542 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm4157-201ENSMUST00000211647 679 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm23680-201ENSMUST00000083162 164 ntBASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col25a1Q99MQ5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm14213-201ENSMUST00000119778 768 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm12906-201ENSMUST00000154610 441 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm26875-201ENSMUST00000181006 950 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm18514-201ENSMUST00000218980 436 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Mir326-201ENSMUST00000083637 95 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col25a1Q99MQ5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms