Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Gm17420-201ENSMUST00000164753 153 ntBASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Gm9823-201ENSMUST00000051212 327 ntBASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rnf111Q99ML9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Gm13315-201ENSMUST00000120376 991 ntBASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Gm11597-201ENSMUST00000121423 964 ntBASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Gm45930-201ENSMUST00000221330 292 ntBASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.74□□□□□ -0.53
Rnf111Q99ML9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Mir1247-201ENSMUST00000116706 82 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm13316-201ENSMUST00000140537 691 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.73□□□□□ -0.53
Rnf111Q99ML9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms