Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm14723-201ENSMUST00000118686 215 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm13316-201ENSMUST00000140537 691 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Mir8109-201ENSMUST00000184375 117 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm44364-201ENSMUST00000198368 141 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm43822-201ENSMUST00000200285 476 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm8227-201ENSMUST00000223306 571 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vmp1Q99KU0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm13342-201ENSMUST00000121055 207 ntBASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm16296-201ENSMUST00000159905 325 ntBASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Gm45925-201ENSMUST00000218882 744 ntBASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Morn2-202ENSMUST00000227729 656 ntBASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vmp1Q99KU0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vmp1Q99KU0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms