Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smc1bQ920F6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smc1bQ920F6 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Gm12165-201ENSMUST00000117047 342 ntBASIC14.02□□□□□ -0.17
Smc1bQ920F6 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Mir6958-201ENSMUST00000184207 73 ntBASIC14.02□□□□□ -0.17
Smc1bQ920F6 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.02□□□□□ -0.17
Smc1bQ920F6 Gm19931-201ENSMUST00000198920 368 ntBASIC14.02□□□□□ -0.17
Smc1bQ920F6 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.02□□□□□ -0.17
Smc1bQ920F6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.02□□□□□ -0.17
Smc1bQ920F6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smc1bQ920F6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gm15711-201ENSMUST00000118889 535 ntBASIC14.01□□□□□ -0.17
Smc1bQ920F6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gm10051-201ENSMUST00000145209 414 ntBASIC14.01□□□□□ -0.17
Smc1bQ920F6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gm5369-201ENSMUST00000217499 588 ntBASIC14.01□□□□□ -0.17
Smc1bQ920F6 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.01□□□□□ -0.17
Smc1bQ920F6 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.01□□□□□ -0.17
Smc1bQ920F6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smc1bQ920F6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14□□□□□ -0.17
Smc1bQ920F6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC14□□□□□ -0.17
Smc1bQ920F6 Gm6580-201ENSMUST00000117504 1357 ntBASIC14□□□□□ -0.17
Smc1bQ920F6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14□□□□□ -0.17
Smc1bQ920F6 Gm6039-201ENSMUST00000121667 1250 ntBASIC14□□□□□ -0.17
Smc1bQ920F6 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14□□□□□ -0.17
Smc1bQ920F6 Gm5778-201ENSMUST00000171003 1072 ntBASIC14□□□□□ -0.17
Smc1bQ920F6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smc1bQ920F6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14□□□□□ -0.17
Smc1bQ920F6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14□□□□□ -0.17
Smc1bQ920F6 Gm28882-201ENSMUST00000185504 314 ntBASIC14□□□□□ -0.17
Smc1bQ920F6 Gm28071-201ENSMUST00000190355 478 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms