Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm23251-201ENSMUST00000103773 110 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm10051-201ENSMUST00000145209 414 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm37246-201ENSMUST00000192665 835 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm26448-201ENSMUST00000082446 203 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb18Q91Y02 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Gm4482-201ENSMUST00000200876 742 ntBASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Gm807-202ENSMUST00000224929 408 ntBASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb18Q91Y02 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Gm24891-201ENSMUST00000104391 136 ntBASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Gm7851-201ENSMUST00000117574 323 ntBASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Gm14665-201ENSMUST00000122294 557 ntBASIC12.67□□□□□ -0.38
Pcdhb18Q91Y02 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms